No. Mike Machin said above that "we should be looking at new replacement stock being at least equal to the latest trains operated by Trans Pennine Express." If you make it 1/3 and 2/3 doors, particularly if they are 1300mm wide, then it would not be "at least equal" to the Nova trains, it would be an inferior product.
The new trains for Cardiff-Portsmouth should therefore be built with single-width doors (like the Nova trains) either at the vehicle ends (which I suppose you'd call 0/3 and 3/3) or, as a compromise, 0/3 and 2/3 doors (almost exactly like the pantograph well coach on a 444 (second coach in
this pic) but with interior partition doors seperating ALL the vestibles from the saloons and assuming the window in front of the leading door of that coach is a bike space or toilet). The doors used should be a modern design of plug door, not the slow clunky ones found on a 158.
If there are still issues with dwell times after making the train longer (more coaches = more doors and less (hopefully zero) standees in the way of said doors to slow things down), using modern door mechanisms and moving the door at ONE END of the coach in about a third then that problem is with the timetable and not the train. If the timetable only allows 30 second dwells for long distance services at places like Bath then that timetable is not fit for purpose and the dwell time allowance must be increased for those services.