I think that LU are planning, long-term, to fit PEDs to the Piccadilly Line when it undergoes an upgrade, but it's a long way in the future, and might require the platform tunnels to be expanded.
Regarding a change of stock on the Jubilee Line, the door placement is fairly standard - I think that only the subsurface stock doesn't use the 1-2-2-1 door formation, although car lengths probably vary somewhat. I suppose that the New Tube For London might end up using a different pattern as it's meant to be interconnecting like an S Stock, but NTfL isn't planned to be used on the Jubilee Line anyway.